GhostFragment
0.0.1

Contents:

  • Theoretical Background
  • Developer Documentation
    • Designing GhostFragment
      • GhostFragment Design Overview
      • Designing GhostFragment’s Input Driver
      • Designing GhostFragment’s FragmentedSystem Driver
      • Designing the FragmentedMolecule Driver
      • Designing GhostFragment’s FragmentedNuclei Driver
      • Designing the NMer Driver
      • GMBE Coefficients
    • GhostFragment Development Topics
  • References
  • Modules API
  • C++ API
GhostFragment
  • Developer Documentation
  • Designing GhostFragment
  • Edit on GitHub

Designing GhostFragment

The goal of GhostFragment is to develop a software framework that makes developing and testing fragment-based methods easy. The topics in this section record the process of designing GhostFragment.

Contents:

  • GhostFragment Design Overview
    • What is GhostFragment?
    • Why do we need GhostFragment?
    • GhostFragment Considerations
    • Design of GhostFragment
  • Designing GhostFragment’s Input Driver
    • What is the Input Driver?
    • Input Driver Considerations
    • Input Driver Design
  • Designing GhostFragment’s FragmentedSystem Driver
    • What is a FragmentedSystem Driver?
    • FragmentedSystem Driver Considerations
    • FragmentedSystem Driver Design
  • Designing the FragmentedMolecule Driver
    • What is the FragmentedMolecule Driver?
    • FragmentedMolecule Driver Considerations
    • FragmentedMolecule Driver Design
  • Designing GhostFragment’s FragmentedNuclei Driver
    • What is the FragmentedNuclei Driver?
    • FragmentedNuclei Driver Considerations
    • FragmentedNuclei Driver Design
  • Designing the NMer Driver
    • What is an \(n\)-mer?
    • Why do we need \(n\)-mers?
    • NMerDriver Considerations
    • NMerDriver Design
  • GMBE Coefficients
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