GhostFragment
0.0.1

Contents:

  • Theoretical Background
    • Fragment Based Methods
    • The Many-Body Expansion
    • Basis Set Superposition Error
    • Established Fragment Based Methods
    • Algorithms for Fragment-Based Methods
    • Difference between fragments and n-mers?
    • Terminology Used Throughout GhostFragment
  • Developer Documentation
  • References
  • Modules API
  • C++ API
GhostFragment
  • Theoretical Background
  • Edit on GitHub

Theoretical Background

The pages in this part attempt to provide a comprehensive theoretical background to the topics of basis-set superposition error and fragment-based methods.

Warning

This is a work in progress. The list of fragment-based methods is incomplete. Furthermore algorithm names are preliminary and may change as the literature is summarized (our intent is to name algorithms after their first occurrence).

Contents:

  • Fragment Based Methods
    • The Problem
    • A solution?
    • The many-body expansion (MBE)
  • The Many-Body Expansion
  • Basis Set Superposition Error
    • History
    • Distance-Based CP
  • Established Fragment Based Methods
    • Overview of Established Fragment Based Methods
    • Timeline of Fragmentation Methods
    • Divide and Conquer Local Correlation (DCLC)
    • Energy-Corrected MFCC
    • Electorstatically-Embedded Many-Body Expansion (EE-MB)
    • Electrostatic Field Adapted MFCC (EFA-MFCC)
    • Fragment Energy Assembler (FEA)
    • Fragment Molecular Orbital Method
    • Generalized Energy Based Fragmentation (GEBF)
    • Kernel Energy Method (KEM)
    • Molecular Tailoring Approach (MTA)
    • Molecular Fractionation with Conjugate Caps (MFCC)
    • Systematic Molecular Fragmentation
  • Algorithms for Fragment-Based Methods
    • Fragmentation Algorithms
    • Capping Methods
    • Embedding Algorithms
    • Screening Methods
  • Difference between fragments and n-mers?
    • The Hypothesis
    • Practical Distincitions
  • Terminology Used Throughout GhostFragment
    • Graph Theory Terminology
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© Copyright 2020, Ryan M Richard.

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